ecology

3 Articles

Mothbox Watches Bugs, So You — Or Your Grad Students — Don’t Have To

September 19, 2024 by 8 Comments

To the extent that one has strong feelings about insects, they tend toward the extremes of a spectrum that runs from a complete fascination with their diversity and the specializations they’ve evolved to exploit unique and ultra-narrow ecological niches, and “Eww, ick! Kill it!” It’s pretty clear that [Dr. Andy Quitmeyer] and his team tend toward the former, and while they love their bugs, spending all night watching them is a tough enough gig that they came up with Mothbox, the automated insect monitor.

Insect censuses are valuable tools for assessing the state of an ecosystem, especially insects’ vast numbers, short lifespan, and proximity to the base of the food chain. Mothbox is designed to be deployed in insect-rich environments and automatically recognize and tally the moths it sees. It uses an Arducam and Raspberry Pi for image capture, plus an array of UV and visible LEDs, all in a weatherproof enclosure. The moths are attracted to the light and fly between the camera and a plain white background, where an image is captured. YOLO v8 locates all the moths in the image, crops them out, and sends them to BioCLIP, a vision model for organismal biology that appears similar to something we’ve seen before. The model automatically sorts the moths by taxonomic features and keeps a running tally of which species it sees.

Mothbox is open source and the site has a ton of build information if you’re keen to start bug hunting, plus plenty of pictures of actual deployments, which should serve as nightmare fuel to the insectophobes out there.

Ecological System Dynamics For Computing

June 23, 2023 by 3 Comments

Some of you may remember that the ship’s computer on Star Trek: Voyager contained bioneural gel packs. Researchers have taken us one step closer to a biocomputing future with a study on the potential of ecological systems for computing.

Neural networks are a big deal in the world of machine learning, and it turns out that ecological dynamics exhibit many of the same properties. Reservoir Computing (RC) is a special type of Recurrent Neural Network (RNN) that feeds inputs into a fixed-dynamics reservoir black box with training only occurring on the outputs, drastically reducing the computational requirements of the system. With some research now embodying these reservoirs into physical objects like robot arms, the researchers wanted to see if biological systems could be used as computing resources.

Using both simulated and real bacterial populations (Tetrahymena thermophila) to respond to temperature stimuli, the researchers showed that ecological system dynamics has the “necessary conditions for computing (e.g. synchronized dynamics in response to the same input sequences) and can make near-future predictions of empirical time series.” Performance is currently lower than other forms of RC, but the researchers believe this will open up an exciting new area of research.

If you’re interested in some other experiments in biocomputing, checkout these RNA-based logic gates, this DNA-based calculator, or this fourteen-legged state machine.

Hackaday Belgrade: Luka Mustafa On Exploiting IoT Niches

July 26, 2018 by 3 Comments

Ecology is a strange discipline. At its most basic, it’s the study of how living things interact with their environment. It doesn’t so much seek to explain how life works, but rather how lives work together. A guiding principle of ecology is that life finds a way to exploit niches, subregions within the larger world with a particular mix of resources and challenges. It’s actually all quite fascinating.

But what does ecology have to do with Luka Mustafa’s talk at the 2018 Hackaday Belgrade Conference? Everything, as it turns out, and not just because Luka and his colleagues put IoT tools on animals and in their environments to measure and monitor them. It’s also that Luka has found a fascinating niche of his own to exploit, one on the edge of technology and ecology. As CEO of Institute IRNAS, a non-profit technology development group in Slovenia, Luka has leveraged his MEng degree, background in ham radio, and interest in LoRaWAN and other wide-area radio networks to explore ecological niches in ways that would have been unthinkable even 10 years ago, let alone in the days when animal tracking was limited by bulky radio collars.

Continue reading “Hackaday Belgrade: Luka Mustafa On Exploiting IoT Niches” →