Using Machine Learning To Cut Down Surgical Videos

Recording video of medical surgeries is a great way to both educate doctors in training and identify process improvements. However, surgeries can be very time consuming, and it can be a gargantuan task to sort through endless hours of video searching for relevant points where the action happens. To tackle this issue, researchers at MIT have used machine learning techniques to analyse videos of surgical procedures.

There’s some fairly serious mathematics behind this sort of videographic analysis.

The machine learning algorithm needed to be trained to identify the relevant parts of surgical videos. To do this, the laparoscopic surgeries being investigated were split up into distinct stages, each relating to a different part of the surgical process. Researchers would then watch recordings of prior surgeries and mark the start of each stage. This data was used to train the model which was then used to sift through other recordings to capture the key moments of each surgery.

The time-saving advantages of such technology could be applied to a great many fields – such an algorithm could be put to great use to sort through hours of uneventful security footage looking for anomalies, or rapidly cut together holiday footage so you only have to see the good parts. We’d love to see the researchers release footage showing the algorithm’s work – thus far, all we have to go off is the project paper.

If you’re thirsty for more machine learning knowledge, read up on the state of working with neural networks in 2017.

Listen To Your Body

[John Miller] has the perfect response next time he complains about an ache or pain and one of his friends says, “You should listen to your body!” As you can see in the video below, he already does. Using two 9V batteries and some instrumentation amplifiers, [John] built an electromyography (EMG) rig.

If you haven’t heard of EMG, think of EEG or EKG, but for muscles instead of your brain or your heart. The LT1167 amplifier is well-suited for this application and even has a data sheet showing how to create an EMG circuit. [John] also used some more garden-variety op amps and the ubiquitous LM386N chip for audio amplification.

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Getting Data Off Proprietary Glucometers Gets A Little Easier

Glucometers (which measure glucose levels in blood) are medical devices familiar to diabetics, and notorious for being proprietary. Gentoo Linux developer [Flameeyes] has some good news about his open source tool to read and export data from a growing variety of glucometers. For [Flameeyes], the process started four years ago when he needed to send his glucometer readings to his doctor and ended up writing his own tool. Previously it was for Linux only, but now has Windows support.

Glucometers use a variety of different data interfaces, and even similar glucometers from the same manufacturer can use different protocols. Getting the data is one thing, but more is needed. [Flameeyes] admits that the tool is still crude in many ways, lacking useful features such as HTML output. Visualization and analysis are missing as well. If you’re interested in seeing if you can help, head over to the GitHub repository for glucomerutils. Also needed are details on protocols used by different devices; [Flameeyes] has only been able to reverse-engineer the protocols of meters he owns.

Speaking of glucometers, there is a project for a Universal Glucometer which aims to be able to use test strips from any manufacturer without needing to purchase a different meter.

Thanks for the tip, [Stuart]!

Go Small, Get Big: The Hack That Revolutionized Bioscience

Few people outside the field know just how big bioscience can get. The public tends to think of fields like physics and astronomy, with their huge particle accelerators and massive telescopes, as the natural expressions of big science. But for decades, biology has been getting bigger, especially in the pharmaceutical industry. Specialized labs built around the automation equipment that enables modern pharmaceutical research would dazzle even the most jaded CERN physicist, with fleets of robot arms moving labware around in an attempt to find the Next Big Drug.

I’ve written before on big biology and how to get more visibility for the field into STEM programs. But how exactly did biology get big? What enabled biology to grow beyond a rack of test tubes to the point where experiments with millions of test occasions are not only possible but practically required? Was it advances in robots, or better detection methodologies? Perhaps it was a breakthrough in genetic engineering?

Nope. Believe it or not, it was a small block of plastic with some holes drilled in it. This is the story of how the microtiter plate allowed bioscience experiments to be miniaturized to the point where hundreds or thousands of tests can be done at a time.

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MRIs: Why Are They So Loud?

My dad was scheduled for his first MRI scan the other day, and as the designated family technical expert, Pop had plenty of questions for me about what to expect. I told him everything I knew about the process, having had a few myself, but after the exam he asked the first question that everyone seems to ask: “Why is that thing so damn loud?”

Sadly, I didn’t have an answer for him. I’ve asked the same question myself after my MRIs, hoping for a tech with a little more time and lot more interest in the technology he or she uses to answer me with more than the “it’s the machine that makes the noise” brush-off. Well, duh.

MRI is one of those technologies that I don’t feel I have a firm enough grasp on, and it seems like something I should really be better versed in. So I decided to delve into the innards of these modern medical marvels to see if I can answer this basic question, plus see if I can address a few more complicated questions.

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Being A Friend To Man’s Best Friend

When [Jason Dorie] tipped us off on this, he said, “This barely qualifies as a hack.” We disagree, as would any other dog lover who sees how it improved the life of his dog with a simple mood-altering doggie-bed carousel.

[Jason]’s hack lies not so much in the rotating dog bed – it’s just a plywood platform on a bearing powered by a couple of Arlo robot wheels. The hack is more in figuring out what the dog needs. You see, [Thurber] is an old dog, and like many best friends who live a long life, he started showing behavioral changes, including endlessly pacing out the same circular path to the point of exhaustion. Circling in old dogs is often a symptom of canine cognitive dysfunction, which is basically the dog version of Alzheimer’s. Reasoning that the spinning itself was soothing, [Jason] manually turned [Thurber]’s dog bed on the floor. [Thurber] calmed down immediately, so the bittersweetly named “Dementia-Go-Round” was built.

Sadly, [Thurber] was actually suffering from a brain tumor, but he still really enjoyed the spinning and it gave him some peace during his last few days. Looking for hacks to help with human dementia? We’ve had plenty of those before too.

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Radio Controlled Pacemakers Are Easily Hacked

Doctors use RF signals to adjust pacemakers so that instead of slicing a patient open, they can change the pacemakers parameters which in turn avoids unnecessary surgery. A study on security weaknesses of pacemakers (highlights) or full Report (PDF) has found that pacemakers from the main manufacturers contain security vulnerabilities that make it possible for the devices to be adjusted by anyone with a programmer and proximity. Of course, it shouldn’t be possible for anyone other than medical professionals to acquire a pacemaker programmer. The authors bought their examples on eBay.

They discovered over 8,000 known vulnerabilities in third-party libraries across four different pacemaker programmers from four manufacturers.  This highlights an industry-wide problem when it comes to security. None of the pacemaker programmers required passwords, and none of the pacemakers authenticated with the programmers. Some home pacemaker monitoring systems even included USB connections in which opens up the possibilities of introducing malware through an infected pendrive.

The programmers’ firmware update procedures were also flawed, with hard-coded credentials being very common. This allows an attacker to setup their own authentication server and upload their own firmware to the home monitoring kit. Due to the nature of the hack, the researchers are not disclosing to the public which manufacturers or devices are at fault and have redacted some information until these medical device companies can get their house in order and fix these problems.

This article only scratches the surface for an in-depth look read the full report. Let’s just hope that these medical companies take action as soon as possible and resolve these issue’s as soon as possible. This is not the first time pacemakers have been shown to be flawed.