flow chart for Assessment of the Feasibility of Using Noninvasive Wearable Biometric Monitoring Sensors to Detect Influenza and the Common Cold Before Symptom Onset paper

Wearables Can Detect The Flu? Well…Maybe…

December 12, 2021 by Orlando Hoilett 15 Comments

Surprisingly there are no pre-symptomatic screening methods for the common cold or the flu, allowing these viruses to spread unbeknownst to the infected. However, if we could detect when infected people will get sick even before they were showing symptoms, we could do a lot more to contain the flu or common cold and possibly save lives. Well, that’s what this group of researchers in this highly collaborative study set out to accomplish using data from wearable devices.

Participants of the study were given an E4 wristband, a research-grade wearable that measures heart rate, skin temperature, electrodermal activity, and movement. They then wore the E4 before and after inoculation of either influenza or rhinovirus. The researchers used 25 binary, random forest classification models to predict whether or not participants were infected based on the physiological data reported by the E4 sensor. Their results are pretty lengthy, so I’ll only highlight a few major discussion points. In one particular analysis, they found that at 36 hours after inoculation their model had an accuracy of 89% with a 100% sensitivity and a 67% specificity. Those aren’t exactly world-shaking numbers, but something the researchers thought was pretty promising nonetheless.

One major consideration for the accuracy of their model is the quality of the data reported by the wearable. Namely, if the data reported by the wearable isn’t reliable itself, no model derived from such data can be trustworthy either. We’ve discussed those points here at Hackaday before. Another major consideration is the lack of a control group. You definitely need to know if the model is simply tagging everyone as “infected” (which specificity does give us an idea of, to be fair) and a control group of participants who have not been inoculated with either virus would be one possible way to answer that question. Fortunately, the researchers admit this limitation of their work and we hope they will remedy this in future studies.

Studies like this are becoming increasingly common and the ongoing pandemic has motivated these physiological monitoring studies even further. It seems like wearables are here to stay as the academic research involving these devices seems to intensify each day. We’d love to see what kind of data could be obtained by a community-developed device, as we’ve seen some pretty impressive DIY biosensor projects over the years.

ETH0 Autumn 2021: Tiny Camp Manages COVID Precautions Indoors

November 5, 2021 by Jenny List 13 Comments

It’s tempting despite news of stubbornly higher-than-ideal COVID infection figures, to imagine that just maybe the world might be returning to some semblance of pre-pandemic normality. Where this is being written we’re a largely vaccinated population long out of lockdown, and though perhaps some of the pandemic pronouncements of our politicians are a bit suspect we’re cautiously able to enjoy most of life’s essentials. Visiting the supermarket and having a beer might be one thing, but the effect of the pandemic is still being felt in our community’s gatherings. BornHack went ahead this summer, but the headline MCH hacker camp was put off until 2022 and the upcoming CCC Congress in Germany is once more to be a virtual event.

But some events manage to put together the right mix of precaution and size. Such was the case with ETH0, a hacker camp which I was happy to attend last weekend.

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Electronic Covid Test Tear Down Shows Frustrating Example Of 1-Time-Use Waste

October 17, 2021 by Al Williams 68 Comments

The latest video from [TheSignalPath] is a result of his purchase of a home COVID-19 test. He found an electronic version that connects to your cell phone and displays the results on the phone. The device is an antigen test and, internally, works like the home tests that show the results using lines similar to a pregnancy test. So, somehow, the phone version reads the lines and communicates with the phone. But how? That’s the point of the video, which you can see below.

In a traditional test, there’s a control line that has to appear to show that the test was done correctly. Then a line under that indicates detection of the virus. The circuit board inside the electronic test has a plastic unit onboard that contains a similar strip and has optical sensors for both the reference line and the detection line. Since it is essentially an optical device — there are some lenses in the strip assembly that look like they are detecting the dye as it moves through the strip with LEDs onboard to shed light on the situation.

Under the microscope, the CPU is a typical Bluetooth-capable ARM chip from Nordic. The board did power up, but the device is made to only operate once because of the test strip. The video notes — and we agree — it seems wasteful to create an entire Bluetooth-enabled microcontroller board with optical components just to read a strip one time that is pretty easy to read to start with. We’ll stick with the simple test strip. Still, it is interesting to see the insides.

If you want to read more about antigen tests, we covered that. We also talked about PCR testing.

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A Raspberry Pi-based COVID Green Pass validator verifies a QR code on a phone.

COVID Green Pass Validator With Raspberry Pi

September 25, 2021 by Kristina Panos No comments

It seems like every nation is dealing with the plague a little differently. In June, the EU instated a COVID Green Pass which comes in the form of a paper or digital QR code. It was designed to grease the wheels of travel throughout Europe and allow access to nursing homes. As of early August, the Green Pass is now required of those 12 and older in Italy to gain access to bars and restaurants, museums, theaters, etc. — anywhere people gather in sizeable groups. The Green Pass shows that you’ve either been vaccinated, have had COVID and recovered, or you have tested negative, and there are different half-lives for each condition: nine months for vaccinated, six for recovered, and just forty-eight hours for a negative test.

[Luca Dentella] has built a Green Pass validator using a Raspberry Pi and a Raspi camera. Actual validation must be done through the official app, so this project is merely for educational purposes. Here’s how it works: the user data including their status and the date/time of pass issuance are encoded into a JSON file, then into CBOR, then it is digitally signed for authenticity. After that, the information is zipped up into a base-45 string, which gets represented as a QR code on your phone. Fortunately, [Luca] found the Minister of Health’s GitHub, which does the hard work of re-inflating the JSON object.

[Luca]’s Pi camera reads in the QR and does complete validation using two apps — a camera client written in Python that finds QRs and sends them to the validation server, written in Node.js. The validation server does formal verification including verifying the signature and the business rules (e.g. has it been more than 48 hours since Karen tested negative?) Fail any of these and the red LED lights up; pass them all and you get the green light. Demo video is after the break.

Are you Canadian? Then check this out, eh?

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Fight Disease With A Raspberry Pi

September 20, 2021 by Bryan Cockfield 4 Comments

Despite the best efforts of scientists around the world, the current global pandemic continues onward. But even if you aren’t working on a new vaccine or trying to curb the virus with some other seemingly miraculous technology, there are a few other ways to help prevent the spread of the virus. By now we all know of ways to do that physically, but now thanks to [James Devine] and a team at CERN we can also model virus exposure directly on our own self-hosted Raspberry Pis.

The program, called the Covid-19 Airborne Risk Assessment (CARA), is able to take in a number of metrics about the size and shape of an area, the number of countermeasures already in place, and plenty of other information in order to provide a computer-generated model of the number of virus particles predicted as a function of time. It can run on a number of different Pi hardware although [James] recommends using the Pi 4 as the model does take up a significant amount of computer resources. Of course, this only generates statistical likelihoods of virus transmission but it does help get a more accurate understanding of specific situations.

For more information on how all of this works, the group at CERN also released a paper about their model. One of the goals of this project is that it is freely available and runs on relatively inexpensive hardware, so hopefully plenty of people around the world are able to easily run it to further develop understanding of how the virus spreads. For other ways of using your own computing power to help fight Covid, don’t forget about Folding@Home for using up all those extra CPU and GPU cycles.

Getting Back Into Hackerspaces

September 4, 2021 by Elliot Williams 14 Comments

Last week, I got my first chance to get out and about among the hackers in what feels like forever. Hackerspaces here in Germany are finally able to re-open for business-as-almost-usual, allowing access to reasonable numbers of people providing they’re immunized or tested, and wearing masks of course. And that meant that I got to take up [Andreas’] invitation to come see his Stereo Ninja inspection microscope project in person.

Stereo Ninja basically makes clever use of two Raspberry Pi cameras, swaps out the optics for greater enlargement, and displays the results on a 3D monitor — to be viewed with shutter glasses. This is one of those projects that you really have to see in person to “get it”. He’s still working on stripping the build down to make it simpler and more affordable, to make the project more accessible to the average hacker.

We talked about DIYing a 3D monitor. It turns out that the shutter glasses are cheap, and it looks like they’re synced by an IR pulse to the monitor. There should be a hacker solution for 3D to work with a fast gaming monitor at least. [Andreas] also pointed me to this great breakout board for the Raspberry Pi CM4 that breaks out both camera lanes for easy stereo / 3D capture. I got the tour of the FabLab, and we talked welding, metal 3D printing, software, hardware and assorted nerdy stuff. [Alex] showed up on his way out of town for the weekend — it’d been ages since we hung out.

In short, I remembered how it used to be in the before-times, when visits with other hackers, and to other hackerspaces, were possible. There’s this spontaneous and mutually inspirational kind of chat that’s just impossible remotely, and is tremendously important.

We’re not done with the COVID pandemic yet, I fear, and different parts of the world have entirely different trajectories. If you told me two years ago that I would be visiting hackerspaces with a mask and proof-of-vaccination, I would have thought you were crazy. But at the same time this brief visit gave me a little boost of hope for the future. We will get through all of this, and we’ll all meet up again at our local hackerspaces.

Reporting From BornHack 2021: Hacker Camps Making It Through The Pandemic

August 31, 2021 by Jenny List 14 Comments

In a normal summer we would be spoiled for choice here in Europe when it came to our community’s events, with one big camp and a host of smaller ones near and far. Only the most hardcore of travelers manage to make it to all of them, but it’s usually possible to take in at least one or two over the season. But of course, this isn’t a normal summer. Many of us may now be vaccinated against COVID-19, but we remain in the grip of a global pandemic. The massive Dutch MCH camp was postponed until 2022, and most of the smaller camps have fallen by the wayside due to uncertainty. But one hacker camp carried on.

BornHack in Denmark was the world’s only in-person summer hacker event of 2020, and on its return last week made it the only such event in Europe for 2021. Having secured a ticket earlier in the year when they went on sale, I navigated the tricky world of cross-border European travel in a pandemic to make my way to the Hylkedam scout camp on the Danish isle of Fyn for a week in the company of hackers from all over Northern Europe. BornHack had achieved the impossible again, and it was time to enjoy a much-needed week at a hacker camp.

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