Enzymes From The Deep – The Polymerase

Our bodies rely on DNA to function, it’s often described as “the secret of life”. A computer program that describes how to make a man. However inaccurate these analogies might be, DNA is fundamental to life. In order for organisms to grown and replicate they therefore need to copy their DNA.

dna-replication
DNA structure and replication

Since the discovery of its structure in 1953, the approximate method used to copy DNA has been obvious. The information in DNA is encoded in 4 nucleotides (which in their short form we call A,T,G, and C). These couple with each other in pairs, forming 2 complimentary strands that mirror each other. This structure naturally lends itself to replication. The two strands can dissociate (under heat we call this melting), and new strands form around each single stranded template.

However, this replication process can’t happen all by itself, it requires assistance. And it wasn’t until we discovered an enzyme called the DNA polymerase that we understood how this worked. In conjunction with other enzymes, double stranded DNA is unwound into 2 single strands which are replicated by the polymerase.

Continue reading “Enzymes From The Deep – The Polymerase”

Organic Chemistry Circuits are Flexible and Work Wet

As circuits find their way into more and more real-world environments, the old standard circuitry isn’t always up to the task. It wasn’t that long ago that a computer needed special power, cooling, and a large room. Now those computers wouldn’t cut it for the top-of-the-line smartphone. However, most modern circuits don’t bend well and don’t like getting wet.

An international team of researchers is developing chemical-based circuitry that uses gold nanoparticles and electrically charged organic molecules to build circuit elements that behave like semiconductor diode junctions. It’s simple to make flexible circuits that don’t mind being wet using this chemical soup.

In an interview with IEEE Spectrum, the developers mentioned that other circuit elements similar to transistors and light sensors should be possible. The circuits aren’t perfect, however. The switching speed needs improvement. Also, while conventional circuits don’t like to get wet, these chemical circuits have difficulties if things get dry. Still, like all technology, things will probably improve over time.

This technology needs a good bit of engineering refinement before it is practical. If you need flexible photosensitive circuits in the near term, you might try here. Meanwhile, waterproof circuitry just needs the right kind of enclosure.

Photo Credit: UNIST/Nature Nanotechnology

Machine Shop Soaps Are Good, Clean Learning Fun

At first glance, it’s easy to dismiss the creation of custom bath soaps as far outside the usual Hackaday subject matter, and we fully expect a torrent of “not a hack” derision in the comments. But to be able to build something from nothing, a hacker needs to be able to learn something from nothing, and there is plenty to learn from this hack.

On the face of it, [Gord] is just making kitschy custom bath soaps for branding and promotion. Cool soaps, to be sure, and the drop or two of motor oil and cutting fluid added to each batch give them a little machine shop flair. [Gord] experimented with different dyes and additives over multiple batches to come up with a soap that looked like machined aluminum; it turns out, though, that adding actual aluminum to a mixture containing lye is not a good idea. Inadvertent chemical reactions excepted, [Gord]’s soaps and custom wrappers came out great.

So where’s the hack? In stepping way outside his comfort zone of machining and metalwork, [Gord] exposed himself to new materials, new techniques, and new failure modes. He taught himself the basics of mold making and casting, how to deal with ultra-soft materials, the chemistry of the soap-making process, working out packaging and labeling issues, and how to deal with the problems that come from scaling up from prototype to production. It may have been “just soap”, but hacks favor the prepared mind.

New Shape-Shifting Polymer Works Hard, Plays Hard

A research group at the University of Rochester has developed a new polymer with some amazing traits. It can be stretched or manipulated into new shapes, and it will hold that shape until heat is applied. Shape-shifting polymers like this already exist, but this one is special: it can go back to its original shape when triggered by the heat of a human body. Oh, and it can also lift objects up to 1000 times its mass.

The group’s leader, chemical engineering professor [Mitch Anthamatten], is excited by the possibilities of this creation. When the material is stretched, strain is induced which deforms the chains and triggers crystallization. This crystallization is what makes it retain the new shape. Once heat is applied, the crystals are broken and the polymer returns to its original shape. These properties imply several biomedical applications like sutures and artificial skin. It could also be used for tailored-fit clothing or wearable technology.

The shape-shifting process creates elastic energy in the polymer, which means that it can do work while it springs back to normal. Careful application of molecular linkers made it possible for the group to dial in the so-called melting point at which the crystallization begins to break down. [Anthamatten] explains the special attributes of the material in one of the videos after the break. Another video shows examples of some of the work-related applications for the polymer—a stretched out strand can pull a toy truck up an incline or crush a dried seed pod.

Continue reading “New Shape-Shifting Polymer Works Hard, Plays Hard”

Eco Friendly Space-Fuel

If you’d like to risk blowing your fingers off for a good cause this week, look no further than [M. Bindhammer]’s search for an eco-friendly rocket fuel. [M. Bindhammer] predicts the increasing use of solid rocket boosters in the future. We’re into that. For now, rocket launches are so few and far between that the pollution doesn’t add up, but when we’re shipping consumer electronics to the moon and back twice a day, we might have a problem.

The most common solid rocket fuel emits chlorine gas into the atmosphere when burned. [Bindhammer] is exploring safe ways to manufacture a eutectically balanced and stabilized fuel compromised of sugar or sugar-alcohol, and potassium nitrate. If you watch home chemistry videos for fun on the weekend like us, [Bindhammer] goes through all his thinking, and even spells out the process for duplicating his fuel safely in a lab.

He’s done a lot of work. The resulting fuel is stable, can be liquid or solid. It has a high ignition temperature, but as you can see in the video after the break. Once ignited. It goes off like rocket fuel.

Continue reading “Eco Friendly Space-Fuel”

Graphene Batteries Appear, Results Questionable

If you listen to the zeitgeist, graphene is the next big thing. It’s the end of the oil industry, the solution to global warming, will feed and clothe millions, cure disease, is the foundation of a space elevator that will allow humanity to venture forth into the galaxy. Graphene makes you more attractive, feel younger, and allows you to win friends and influence people. Needless to say, there’s a little bit of hype surrounding graphene.

With hype comes marketing, and with marketing comes products making dubious claims. The latest of which is graphene batteries from HobbyKing. According to the literature, these lithium polymer battery packs for RC planes and quadcopters, ‘utilize carbon in the battery structure to form a single layer of graphene… The graphene particles for a highly dense compound allowing electrons to flow with less resistance compared to traditional Lipoly battery technologies” These batteries also come packaged in black shrink tubing and have a black battery connector, making them look much cooler than their non-graphene equivalent. That alone will add at least 5mph to the top speed of any RC airplane.

For the last several years, one of the most interesting potential applications for graphene is energy storage. Graphene ultracapacitors are on the horizon, promising incredible charge densities and fast recharge times. Hopefully, in a decade or two, we might see electric cars powered not by traditional lithium batteries, but graphene supercapacitors. They’ll be able to recharge in minutes and drive further, allowing the world to transition away from a fossil fuel-based economy. World peace commences about two weeks after that happens.

No one expected graphene batteries to show up now, though, and especially not from a company whose biggest market is selling parts to people who build their own quadcopters. How do these batteries hold up? According to the first independent review, it’s a good battery, but the graphene is mostly on the label.

[rampman] on the RCgroups forums did a few tests on the first production runs of the battery, and they’re actually quite good. You can pull a lot of amps out of them, they last through a lot of charging cycles, and the packaging – important for something that will be in a crash – is very good. Are these batteries actually using graphene in their chemistry? That’s the unanswered question, isn’t it?

To be fair, the graphene batteries shipped out to reviewers before HobbyKing’s official launch do perform remarkably well. In the interest of fairness, though, these are most certainly not stock ‘graphene’ battery packs. The reviewers probably aren’t shills, but these battery packs are the best HobbyKing can produce, and not necessarily representative of what we can buy.

It’s also doubtful these batteries use a significant amount of graphene in their construction. According to the available research, graphene increases the power and energy density of batteries. The new graphene batteries store about as much energy as the nano-tech batteries that have been around for years, but weigh significantly more. This might be due to the different construction of the battery pack itself, but the graphene battery should be lighter and smaller, not 20 grams heavier and 5 mm thicker.

In the RC world, HobbyKing is known as being ‘good enough’. It’s not the best stuff you can get, but it is cheap. It’s the Wal-Mart of the RC world, and Wal-Mart isn’t introducing bleeding edge technologies that will purportedly save the planet. Is there real graphene in these batteries? We await an in-depth teardown, preferably with an electron microscope, with baited breath.

“You Sank my Dysprosium!”: Periodic Table Battleship

Kids these days, they have it so easy. Back in the old days, we learned our elements the hard way, by listening to “The Elements” by Tom Lehrer over and over until the vinyl wore out on the LP. Now, thanks to [Karyn], kids can learn the elements by playing “Battleship” – no tongue-twisting lyrics required.

For anyone familiar with the classic “Battleship” game, you’ll wonder why no one thought of this before. [Karyn]’s version of the game is decidedly low-tech, but gets the job done. She printed out four copies of the periodic table, added letters to label the rows, and laminated them. A pair of tables goes into a manila file folder, the tops get clipped together, and dry-erase markers are used to mark out blocks of two to five elements to represent the ships of the Elemental Navy on the lower table. Guesses at the location of the enemy ships can be made by row and series labels for the elementally challenged, or better yet by element name. Hits and misses are marked with Xs and Os on the upper table, and play proceeds until that carrier hiding in the Actinide Archipelago is finally destroyed.

This is pure genius in its simplicity and practicality, but of course there’s room for improvement. The action-packed video after the break reveals some structural problems with the file folders, so that’s an obvious version 2.0 upgrade. And you can easily see how this could be used for other tabular material – Multiplication Table Battleship? Sounds good to us. And if your nippers catch the chemistry bug from this, be sure to take a deeper dive into the structure of the periodic table with them.

Now, if you’ll excuse me: “There’s antimony, arsenic, aluminum, selenium, and hydrogen and oxygen and nitrogen and rhenium….”

Continue reading ““You Sank my Dysprosium!”: Periodic Table Battleship”