Open-Source Biology And Biohacking Hack Chat

Join us on Wednesday at noon Pacific time for the open-source biology and biohacking Hack Chat!

Justin Atkin‘s name might not ring a bell, but you’ve probably seen his popular YouTube channel The Thought Emporium, devoted to regular doses of open source science. Justin’s interests span a wide range, literally from the heavens above to the microscopic world.

His current interest is to genetically modify yeast to produce spider silk, and to perhaps even use the yeast for brewing beer. He and the Thought Emporium team have been busy building out a complete DIY biology lab to support the effort, and have been conducting a variety of test experiments along the way.

Please join us for this Hack Chat, in which we’ll cover:

  • The how’s and why’s of yeast genetic engineering;
  • What it takes to set up an effective biology lab from scratch;
  • An update on the current status of the spider-silk yeast project; and
  • Where the open-source biology field is, and where it’s going.

You are, of course, encouraged to add your own questions to the discussion. You can do that by leaving a comment on the Open-Source Biology and Biohacking Hack Chat event page and we’ll put that in the queue for the Hack Chat discussion.

join-hack-chatOur Hack Chats are live community events on the Hackaday.io Hack Chat group messaging. This week we’ll be sitting down on Wednesday, February 13, at noon, Pacific time. If time zones have got you down, we have a handy time zone converter.

Click that speech bubble to the right, and you’ll be taken directly to the Hack Chat group on Hackaday.io. You don’t have to wait until Wednesday; join whenever you want and you can see what the community is talking about.

Building A RISC-V Desktop

If you want to talk about RISC-V, the Open Source instruction set for CPUs, you’re probably talking about microcontrollers. You can buy small but powerful RISC-V micros on par with an ARM Cortex-M4 right now. Deep in the pipeline are cores for something resembling SoCs, the kind you’d find in desktop NAS solutions, maybe a few routers, and smart TVs. This is great and all, but our idea of a ‘computer’ is still a desktop. When is the Open instruction set desktop coming? Well, it’s here right now. [Andrew Back] built a RISC-V desktop computer. It runs Linux, it comes in a case, it has HDMI and USB, there’s a graphics card in there somewhere, and it works. This is a desktop, running with a RISC-V core.

The core of this build is the HiFive Unleashed, a Linux-capable board from SiFive, makers of the first (production) RISC-V microcontroller. This board uses the Freedom U540 SOC built with a 28nm process, has 8GB of DDR4, and 32MB of Flash. For a board built on an Open archetecuture this is impressive, but it comes at a cost: the HiFive Unleashed ran for $1000 during its crowdfunding campaign.

But a board with an Open CPU does not a desktop make. You need peripheral IO, maybe a few PCIe, and hopefully a SATA interface. This problem has been solved by Microsemi with an Expansion board for the HiFive Unleashed. It includes a big ‘ol FPGA and all the connectors you could use. It also costs $2000.

With most of the parts ready to go, a few buttons, M.2 PCIe and SATA SSD storage, a graphics card, and a nice acrylic case were added. Thanks to Western Digital, building Linux was as easy as building Linux, and you end up with a desktop computer with a RISC-V brain.

Compared to a bog-standard ‘gaming machine’, this is an expensive build. The quick and dirty ballpark for the price is somewhere around $4000 USD for a machine that will let you check your Facebook. There’s a video of the machine running, you can check that out below.

Continue reading “Building A RISC-V Desktop”

Automate The Freight: Amazon Tackles The Last Mile Problem On Wheels

We’ve been occasionally exploring examples of what could be the killer application for self-driving vehicles: autonomous freight deliveries, both long-haul and local, as well as some special use cases. Some, like UAV delivery of blood and medical supplies in Kenya, have taken off and are becoming both profitable and potentially life-saving. Others, like driverless long-haul trucking, made an initial splash but appear to have gone quiet since then. This is to be expected, as the marketplace picks winners and losers in a neverending quest to maximize return on investment. But the whole field seems to have gotten a bit sleepy lately, with no big news of note for quite a while.

That changed last week with Amazon’s announcement of Scout, their autonomous delivery vehicle. Announced first on Amazon’s blog and later picked up by the popular and tech press who repeated the Amazon material almost verbatim, Scout appears at first glance to be a serious attempt by Amazon to own the “last mile” of delivery – the local routes that are currently plied by the likes of UPS, FedEx, and various postal services. Or is it?

Continue reading “Automate The Freight: Amazon Tackles The Last Mile Problem On Wheels”

Two Joysticks Talk To FPGA Arcade Game Over A VGA Cable

We really love when hacks of previous hacks show up in the tip line. It shows how the hardware hacking community can be a feedback loop, where one hack begets the next, and so on until great things are everywhere. This hacked joystick port for an FPGA Pac Man game is a perfect example of that creative churn.

The story starts with Pano Man, a version of the venerable arcade game ported to a Pano Logic FPGA thin client by [Skip]. We covered that story when it first came out, and it caught the attention of [Tom Verbeure], particularly the bit in the GitHub readme file which suggested there might be a better way to handle the joystick connections. So [Tom] took up the challenge of using the Extended Display Identification Data (EDID) circuit in the VGA connector to support an Atari 2600 joystick. The EDID system is an I²C bus, so the job needed the right port expander. [Tom] chose the MCP23017, a 16-bit device that would have enough GPIO for dual joysticks and a few extra buttons. Having never designed a PCB before, [Tom] fell down that rabbit hole for a bit, but quickly came up with a working design, and then a better one, and then the final version. The video below shows it in action with Pano Man.

We think the creative loop between [Skip] and [Tom] was great here, and we can’t wait to see who escalates next. And it’s pretty amazing how much IO can be stuffed over two wires if you have the right tools. Check out this VGA sniffing effort to learn more about EDID and I²C.

Continue reading “Two Joysticks Talk To FPGA Arcade Game Over A VGA Cable”

Little FPV Bot Keeps It Simple With An ESP32

When it comes to robots, it seems the trend is to make them as complicated as possible – look at anything from Boston Dynamics if you’ve any doubt of that. But there’s plenty to be said for simple robots too, such as this adorable ESP32-driven live-streaming bot.

Now it’s true that [Max.K]’s creation is more remote controlled car than robot, and comparing it to one of the nightmare-fuelling creations of Boston Dynamics is perhaps unfair. But [Max.K]’s new project is itself a simplification and reimagining of his earlier, larger “ZeroBot“. As the name implies, ZeroBot was controlled by a Raspberry Pi Zero, an obvious choice for a mobile platform designed to stream FPV video. The ESP32 bot eschews the Pi platform in favor of, well, an ESP32. To save as much space as possible, [Max.K] did a custom PCB for the microcontroller and its supporting components. The 3D-printed case is nicely designed to hold the board along with two motors, a small VGA camera, and a battery pack. At 160×120 resolution, the video isn’t amazing, but the fact that it can be streamed from the ESP32 at a decent enough framerate to drive the bot using a simple web interface is impressive.

This was a fun project and a very clean, smooth build. We like the lines of this little bot, and wouldn’t mind building one as a quick weekend project ourselves.

Continue reading “Little FPV Bot Keeps It Simple With An ESP32”

How To Make Bisected Pine Cones Look Great, Step-by-Step

[Black Beard Projects] sealed some pine cones in colored resin, then cut them in half and polished them up. The results look great, but what’s really good about this project is that it clearly demonstrates the necessary steps and techniques from beginning to end. He even employs some homemade equipment, to boot.

Briefly, the process is to first bake the pine cones to remove any moisture. Then they get coated in a heat-activated resin for stabilizing, which is a process that infuses and pre-seals the pine cones for better casting results. The prepped pine cones go into molds, clear resin is mixed with coloring and poured in. The resin cures inside a pressure chamber, which helps ensure that it gets into every nook and cranny while also causing any small air bubbles introduced during mixing and pouring to shrink so small that they can’t really be seen. After that is cutting, then sanding and polishing. It’s an excellent overview of the entire process.

The video (which is embedded below) also has an outstanding depth of information in the details section. Not only is there an overview of the process and links to related information, but there’s a complete time-coded index to every action taken in the entire video. Now that’s some attention to detail.

Continue reading “How To Make Bisected Pine Cones Look Great, Step-by-Step”

New Part Day: Mapping With RealSense Cameras For $200

Robot cars, DIY or otherwise, are hot right now. To do this right, you’re going to need cameras, LIDAR, or some other way of sensing the the world. Intel is again getting into the fray with a RealSense tracking camera for simultaneous localization and mapping for robotics, drone, and augmented reality needs.

The tech specs for the Intel RealSense T265 are impressive for small robotics uses. It includes 6DoF tracking gathered by two cameras, each with a 170° FoV. Connection to a computer is through USB 2.0 or 3.0. If you want to get an idea of how seriously Intel is taking the ‘robotics, and other power- and weight-limited platforms’ market, here’s a sample of what is on the one-page spec sheet: the T265 only uses 1.5 Watts, weighs 55 grams, and is 108 x 25 x 13 mm. There are also two M3 taps spaced 50mm apart on the back, which is an astonishing spec to publish on the product landing page. Simply the fact that the location and dimensions of the mounting holes is so prominent gives you an idea of how seriously Intel is taking robotics and prototyping applications.

This new SLAM camera complements Intel’s other tracking camera offerings, including those we’ve seen at Maker Faires past. It’s a competitor to the new crop of solid state LIDAR modules we’ve seen pop up recently. It’s not a Kinect, but we’re years past using a first-gen Kinect for robotics applications. Now, everything is custom chips and SLAM processing, and the RealSense T265 is the smallest platform to do that now.